Error when making fur regarding stream

[PacoRM24]

Hello, thanks for creating fur.

I have some trouble with the install of fur. When I use the make command, I get the following error:

make[1]: Entering directory '/mnt/c/Users/Paco/Desktop/fur/stream' awk -f ../scripts/preTangle.awk stream.org | bash ../scripts/org2nw | notangle -Rstream.go | gofmt > stream.go go build -ldflags "-X github.com/evolbioinf/fur/util.version=v4.2-11-g06c391e -X github.com/evolbioinf/fur/util.date=11_Feb_2024" stream.go awk '$6==1' sim.dat | awk '{print $1, $2, $5}' > time_1.dat plotLine -L -x "Sequence Length (Mb)" -y "Time (s)" -d "6cm,5cm" -p time_1.ps time_1.dat /bin/sh: 1: plotLine: not found make[1]: *** [Makefile:12: time_1.ps] Error 127 make[1]: Leaving directory '/mnt/c/Users/Paco/Desktop/fur/stream'

What can I do to fix this problem?

Thanks for helping me.

Paco

[haubold]

Thank you for pointing out this problem. The solution is to also install the program plotLine, which is part of the biobox repository. I have now clarified the dependency on biobox in the README.

[PacoRM24]

I also install the biobox repository and add the bin directory to the PATH, but still doesn't work. I get the following error:

make[1]: Entering directory '/mnt/c/Users/Paco/Desktop/fur/stream' plotLine -L -x "Sequence Length (Mb)" -y "Time (s)" -d "6cm,5cm" -p time_1.ps time_1.dat /bin/sh: 1: plotLine: not found make[1]: *** [Makefile:12: time_1.ps] Error 127 make[1]: Leaving directory '/mnt/c/Users/Paco/Desktop/fur/stream'

What do you think I'm doing wrong? Thanks for the help.

[PacoRM24]

Hi again I think I solved the problem. I add the whole root of the plotLine command on the Makefile in stream and doc directories. At least with this I didn't get any errors. I hope that when running the whole program, it works well.

Thanks for your help. Paco