cannot import module BaggingClassifier

[avilella]

I tried to install scikit-mdr on an Ubuntu 14.04 Linux via pip install but got this error below. To make sure it wasn't a versions issue with scikit-learn, I did a sudo pip install -U scikit-learn, which completed successfully, then tried to load MDR on a python console. See below.

Any ideas?

Successfully installed scikit-learn
Cleaning up...
avilella@ubuntu14:~$ 
avilella@ubuntu14:~$ python
Python 2.7.6 (default, Oct 26 2016, 20:30:19) 
[GCC 4.8.4] on linux2
Type "help", "copyright", "credits" or "license" for more information.
>>> from mdr import MDR
Traceback (most recent call last):
  File "<stdin>", line 1, in <module>
  File "/usr/local/lib/python2.7/dist-packages/mdr/__init__.py", line 23, in <module>
    from .mdr_ensemble import MDREnsemble
  File "/usr/local/lib/python2.7/dist-packages/mdr/mdr_ensemble.py", line 26, in <module>
    from sklearn.ensemble import BaggingClassifier
ImportError: cannot import name BaggingClassifier

[rhiever]

One of the scikit-MDR algorithms uses scikit-learn's BaggingClassifier, which should be available in your installation of scikit-learn.

What version of scikit-learn is installed?

import sklearn
print sklearn.__version__

[avilella]

avilella@ubuntu14:~$ python Python 2.7.6 (default, Oct 26 2016, 20:30:19) [GCC 4.8.4] on linux2 Type "help", "copyright", "credits" or "license" for more information.

import sklearn print sklearn.version 0.14.1

On Wed, Aug 23, 2017 at 5:12 PM, Randy Olson [email protected] wrote:

One of the scikit-MDR algorithms uses scikit-learn's BaggingClassifier http://scikit-learn.org/stable/modules/generated/sklearn.ensemble.BaggingClassifier.html, which should be available in your installation of scikit-learn.

What version of scikit-learn is installed?

import sklearnprint sklearn.version

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[rhiever]

That explains it. The latest version of scikit-learn is 0.19, and the BaggingClassifier was probably added after 0.14.1.

If you use the Anaconda distribution, I believe they have scikit-learn up-to-date for Python 2.7.