LDlinkR
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LDlinkR
Hello, I am conducting a series of cis-mendelian randomization analyses for a number of proteins and an outcome. In some cases I have SNPs that are missing from the outcome...
Prepare for release: * [x] `git pull` * [x] Check [current CRAN check results](https://cran.rstudio.org/web/checks/check_results_LDlinkR.html) * [x] [Polish NEWS](https://style.tidyverse.org/news.html#news-release) * [x] `usethis::use_github_links()` * [x] `urlchecker::url_check()` * [x] `devtools::check(remote = TRUE, manual...
Prepare for release: * [x] `git pull` * [x] Check [current CRAN check results](https://cran.rstudio.org/web/checks/check_results_LDlinkR.html) * [x] Check if any deprecation processes should be advanced, as described in [Gradual deprecation](https://lifecycle.r-lib.org/articles/communicate.html#gradual-deprecation) *...
Hi I am using LDmatrix in a R script after saving it in .Renviron The script is using LDmatrix in a loop for each chromosome and now it is few...
Senf to `LDlinkR` maintainer email address from user ZEY, with minor edits: I am contacting you in regards to your recently published R package LDlinkR. ...... However, I’d like to...
LDproxy_batch displays the message "LDlink server is working..." for each query SNP.
Make error message for variants that are not biallelic more informative. e.g. > i="rs7579722" > j="rs11640926" > LDpair(var1= i, var2= j, pop = c("CEU", "TSI", "FIN", "GBR", "IBS"), token =...
Could we have an output when there is no match, something like: ```R LDmatrix(snps = c("rs496202", "rs11147477", "rsxyz"), pop = "EUR", r2d = "r2", token = LDLINK_TOKEN) # RS_number rs496202...
