CAMITAX

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not working with singularity

1

I have followed the instructions in the readme for downloading the databases but now I'm trying to run camitax on real genomes and I get a lot of errors: ```...

sconlan

Issues installing docker

1

Hello, I was trying to use CAMITAX with docker. All the databases have been successfully downloaded. However, I'm having issues with downloading and installing docker. `conda install -c conda-forge/label/cf202003 docker`...

RolandWirth

Hi! The first checkM step that defines the root dir does not work when using Singularity as those containers are read only, and that command tries to change a config...

Shellfishgene

Suggestion : Run checkm on more than 1 MAG at a time

1

Hi, I have a few hundred MAGs that I want to taxonomically check and I realized that the checkm software is run MAG per MAG as are all the other...

michoug