bioconductor_full

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installation of package ‘BiocVersion’ had non-zero exit status with devel 3.11

12

I tried running `BiocManager::install()` to upgrading my packages library with the new 3.11 container. Packages updated except for `BiocVersion`, which is on `site-library`, due to insufficient permissions. I started R...

lwaldron

Why bioc and rstudio users?

11

In the documentation, can you explain the reason for having two different users (`rstudio` and `bioc`) on the image? And, is it OK for the user to run the image...

lwaldron

How does bioconductor_full compare to build system?

2

Has anyone done any formal checking to see if bioconductor_full is equivalent to the build system?

seandavi

Unable to install some packages (Biobase) in Docker for Windows 10

8

Dear all, that's more of an observation that I had and maybe not an issue of the BioC docker image... I was testing the docker/Bioconductor setup on Windows 10 (using...

jorainer

In production, use a [mirror](http://bioconductor.org/about/mirrors/mirror-how-to/) to rsync and install libraries. This saves the "download time" of packages they are being installed. http://bioconductor.org/about/mirrors/mirror-how-to/

nturaga