Benchmark-Models-PEtab
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Zheng_PNAS2012: measurements matches simulation
Reported by @plakrisenko
The measurements and simulation are almost identical.
Comparing the data [1] and simulation [2] from the original benchmark collection.
- [1] seems to correspond with the data and simulated data in our PEtab problem
- [1] contains the same standard deviation values everywhere... probably the estimated
sigmain our PEtab problem - [2] contains negative values...
[1] https://github.com/Benchmarking-Initiative/Benchmark-Models/blob/master/Benchmark-Models/Zheng_PNAS2012/Data/model1_data1.xlsx [2] https://github.com/Benchmarking-Initiative/Benchmark-Models/blob/master/Benchmark-Models/Zheng_PNAS2012/SimulatedData/model1_data1.xlsx
Zheng_PNAS2012_simulated_w_nominal_values.csv Also, [2] is different from what I get when simulating with nominal values from parameter table