IntaRNA
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outnolp bug
--> IntaRNA -q AACCGUGGCUUUCGAUUGUUAC -t AACCGUGGCUUUCGAUUGUUAC -n 50 --outmode=C --outcsvcols=hybridDPfull,E,ED1,ED2,E_hybrid --outmaxE=-3 --noseed --outnolp
# INFO : Since no seed constraint needed: resetting model from 'X' to 'S'
hybridDPfull;E;ED1;ED2;E_hybrid
...........((((.......&...........)))).......;-3.7;0;0;-3.7
Mmann@BILP10:/cygdrive/c/Research
--> IntaRNA -q AACCGUGGCUUUCGAUUGUUAC -t AACCGUGGCUUUCGAUUGUUAC -n 50 --outmode=C --outcsvcols=hybridDPfull,E,ED1,ED2,E_hybrid --outmaxE=-3 --noseed
# INFO : Since no seed constraint needed: resetting model from 'X' to 'S'
hybridDPfull;E;ED1;ED2;E_hybrid
...........((((.......&...........)))).......;-3.7;0;0;-3.7
....(((((..((((.......&...........))))..)))));-3.56;3.12;3.12;-9.8