BRAINSTools
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BRAINSia
A suite of tools for medical image processing focused on brain analysis
This includes the following changes: WIP: submitted HuiText directory and CMakeLists revision ENH: Add function reading itk 3D image into matlab array
I'm running ubuntu and I'm trying to install BRAINSTools. I followed the instructions: ``` sudo apt-get update sudo apt-get upgrade sudo apt-get install git python2.7 python2.7-dev g++ freeglut3-dev ``` And...
There are code locations where the value of a `switch` or logic for an `if/else` is different, but the contents are the same. These have now been combined so the...
This includes one commit: ENH: NO zlib. This commit removes zlib from all external packages.
This includes the following changes: - ENH: modify subject dictionary - Subject dictionary now expects `subject` and `session` as keys in the dictionary - ENH: renaming files to match bids...
https://brainsia.github.io/BRAINSTools/ has outdated information. The files are located in the "/docs" directory. Please update the style, content, and references to the best of your current knowledge.
I am trying to convert a DTIPrep's output back to Nifti format, and the DWIConvert tool threw a segmentation fault error. Here are details: 1. Convert original Nifti to Nrrd,...
I am trying to register two volumes with BRAINSFit from slicer 4.5.0-1. Everything works fine with BSpline, with a ROI, but without "Define BSpline grid over the ROI bounding box"....
This bug impacts DICOM conversion of 16-bit UNSIGNED data with voxels where raw intensity exceeds 32767 (e.g. MRI magnitude images using full range of 16-bit datatype) Consider a DICOM file...
I am only suggesting this (not committing change) because my branch is kinda old to confirm this behavior. If someone is actively testing template.py, please do proceed update. Otherwise, please...
