KAZU

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Bumps [ejs](https://github.com/mde/ejs) from 3.1.8 to 3.1.10. Release notes Sourced from ejs's releases. v3.1.10 Version 3.1.10 v3.1.9 Version 3.1.9 Commits d3f807d Version 3.1.10 9ee26dd Mocha TDD e469741 Basic pollution protection 715e950...

dependabot[bot]

Issues with AbbreviationFinderStep deleting entities

22

I noticed that kazu changed the input text. I'm curious how it made this mistake and how to prevent it. To recreate: I passed in a text block that contained...

simoond

Currently, we exclude all TAs: as these refer to areas that are not necessarily disease specific. We should make sure we don't filter disease specific TAs (e.g. https://platform.opentargets.org/disease/EFO_0005741)

RichJackson

Scaling KAZU to run over millions of abstracts

5

Hi, thanks again for sharing KAZU, it looks like exactly the tool I need for setting up a simple biomed NLP system. I am planning on using KAZU to add...

kajocina

Extending Kazu

8

I am new to Kazu and quite fascinated by it, but I want to find out if Kazu is flexible to the point that a developer can bring an additional...

raylite

Relation extraction?

1

I was wondering whether relation extraction (e.g. geneX associated-with diseaseY, or geneX interacts-with geneY, etc) is on your roadmap?

svlandeg

Complete Documentation - 'TBA' pages

14

Hello, the documentation is incomplete also is the code for the demo project available on Git Hub? Thank you

joe-rabbit

For example, "DNA damage response" or "DNA repair" are not matching despite being very common terms.

kajocina

Docs webserver (docs/kazu_webservice.rst)

2

I added a simple tutorial on how to run python -m kazu.web.server (i.e., host a REST API server). This addresses issue #7. Please feel free to review and provide any...

wonjininfo

The example of this page is shown in http://kazu.korea.ac.kr/

dmcheon