data.validator
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Appsilon
[Bug]: Saving report fails if there are validation warnings
Guidelines
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Project Version
2.4.1
Platform and OS Version
Windows 10
Existing Issues
No response
What happened?
When using save_report() for a report that has validation warnings, an error is thrown due to a missing df_error_head_n argument.
Steps to reproduce
You can use a simplified version of the first example on the 'All you need to know about 'data.validator' vignette.
library(assertr)
library(dplyr)
report <- data_validation_report()
validate(mtcars) %>%
validate_cols(description = "vs and am values should equal 3 or 4",
skip_chain_opts = TRUE,
error_fun = warning_append, in_set(c(3, 4)), gear, carb) %>%
add_results(report)
save_report(report)
#>
#> Quitting from lines 12-13 [generate_report] (skeleton.Rmd)
#> Error in `purrr::map()`:
#> ℹ In index: 1.
#> Caused by error in `purrr::map()`:
#> ℹ In index: 1.
#> Caused by error in `purrr::map()`:
#> ℹ In index: 1.
#> Caused by error in `make_accordion_element()`:
#> ! argument "df_error_head_n" is missing, with no default
#> Backtrace:
#> ▆
#> 1. ├─params$generate_report_html(params$extra_params)
#> 2. │ ├─base::do.call(private$report_constructor, params_list) at data.validator/R/report.R:51:6
#> 3. │ └─data.validator (local) `<fn>`(validation_results = `<tibble[,8]>`)
#> 4. │ ├─... %>% htmlwidgets::onRender(post_render_js) at data.validator/R/semantic_report_constructors.R:408:2
#> 5. │ └─data.validator:::get_semantic_report_ui(...)
#> 6. │ └─... %>% htmltools::div() at data.validator/R/semantic_report_constructors.R:359:2
#> 7. ├─htmlwidgets::onRender(., post_render_js)
#> 8. │ └─htmlwidgets:::addHook(x, "render", jsCode, data)
#> 9. ├─shiny.semantic::uirender(., width = "100%", height = "100%")
#> 10. │ └─base::toString(ui)
#> 11. ├─htmltools::div(.)
#> 12. │ └─rlang::dots_list(...)
#> 13. ├─purrr::map(...)
#> 14. │ └─purrr:::map_("list", .x, .f, ..., .progress = .progress)
#> 15. │ ├─purrr:::with_indexed_errors(...)
#> 16. │ │ └─base::withCallingHandlers(...)
#> 17. │ ├─purrr:::call_with_cleanup(...)
#> 18. │ └─data.validator (local) .f(.x[[i]], ...)
#> 19. │ └─... %>% ... at data.validator/R/semantic_report_constructors.R:360:4
#> 20. ├─data.validator:::display_results(...)
#> 21. │ ├─data.validator:::segment(...) at data.validator/R/semantic_report_constructors.R:253:2
#> 22. │ │ └─htmltools::div(...) at data.validator/R/semantic_report_constructors.R:8:2
#> 23. │ │ └─rlang::dots_list(...)
#> 24. │ ├─data.validator:::make_accordion_container(...)
#> 25. │ │ ├─htmltools::tagList(...) at data.validator/R/semantic_report_constructors.R:174:2
#> 26. │ │ │ └─rlang::dots_list(...)
#> 27. │ │ └─htmltools::div(...)
#> 28. │ │ └─rlang::dots_list(...)
#> 29. │ └─data.validator:::make_accordion_element(...)
#> 30. │ ├─htmltools::tagList(...) at data.validator/R/semantic_report_constructors.R:205:2
#> 31. │ │ └─rlang::dots_list(...)
#> 32. │ ├─htmltools::div(...)
#> 33. │ │ └─rlang::dots_list(...)
#> 34. │ └─data.validator:::result_table(results, type, mark, df_error_head_n)
#> 35. │ ├─htmltools::tags$table(...) at data.validator/R/semantic_report_constructors.R:138:4
#> 36. │ │ └─rlang::dots_list(...)
#> 37. │ ├─htmltools::tags$tbody(...)
#> 38. │ │ └─rlang::dots_list(...)
#> 39. │ └─purrr::map(...)
#> 40. │ └─purrr:::map_("list", .x, .f, ..., .progress = .progress)
#> 41. │ ├─purrr:::with_indexed_errors(...)
#> 42. │ │ └─base::withCallingHandlers(...)
#> 43. │ ├─purrr:::call_with_cleanup(...)
#> 44. │ └─data.validator (local) .f(.x[[i]], ...)
#> 45. │ └─data.validator:::make_table_row(results[.x, ], type, mark, df_error_head_n = df_error_head_n)
#> 46. │ ├─htmltools::div(...) at data.validator/R/semantic_report_constructors.R:88:4
#> 47. │ │ └─rlang::dots_list(...)
#> 48. │ ├─htmltools::div(...)
#> 49. │ │ └─rlang::dots_list(...)
#> 50. │ ├─htmltools::div(...)
#> 51. │ │ └─rlang::dots_list(...)
#> 52. │ ├─htmltools::tagList(prepare_modal_content(results, df_error_head_n))
#> 53. │ │ └─rlang::dots_list(...)
#> 54. │ └─data.validator:::prepare_modal_content(results, df_error_head_n)
#> 55. │ ├─... %>% htmltools::tagList() at data.validator/R/semantic_report_constructors.R:25:2
#> 56. │ └─purrr::map(...)
#> 57. │ └─purrr:::map_("list", .x, .f, ..., .progress = .progress)
#> 58. │ ├─purrr:::with_indexed_errors(...)
#> 59. │ │ └─base::withCallingHandlers(...)
#> 60. │ ├─purrr:::call_with_cleanup(...)
#> 61. │ └─data.validator (local) .f(.x[[i]], ...)
#> 62. │ ├─htmltools::div(...) at data.validator/R/semantic_report_constructors.R:26:4
#> 63. │ │ └─rlang::dots_list(...)
#> 64. │ ├─htmltools::HTML(...)
#> 65. │ ├─knitr::kable(...)
#> 66. │ ├─utils::head(error$error_df[[1]][[.x]], n = df_error_head_n)
#> 67. │ └─utils (local) head.data.frame(error$error_df[[1]][[.x]], n = df_error_head_n)
#> 68. │ └─utils:::checkHT(n, d <- dim(x))
#> 69. ├─htmltools::tagList(.)
#> 70. │ └─rlang::dots_list(...)
#> 71. └─base::.handleSimpleError(...)
#> 72. └─purrr (local) h(simpleError(msg, call))
#> 73. └─cli::cli_abort(...)
#> 74. └─rlang::abort(...)
Created on 2023-12-21 with reprex v2.0.2
Expected behavior
An error shouldn't occur. The issue is that the df_error_head_n argument is not being passed to the make_accordion_element() for validation warnings, in display_results(). So if I understand correctly I think its just a one-line fix.
This is assuming that it should be the same and not a separate df_warning_head_n argument. Hope that makes sense.
Attachments
No response
Screenshots or Videos
No response
Additional Information
As this is a relatively small, simple change I'm happy to raise a PR for it myself if you'd prefer. Just let me know!
