AdvancePyTorchGeometricTutorials about Tutorial2

when i installed PyG 2.0 and move the graphgym code to my host, whether i can directly run run_single.sh？ truthly, when i finished these step, i can not run run_single.sh

Dec 15 '21 03:12 faker09

Hi and welcome! Can you give us some more detail? What kind of error message do you get?

Dec 15 '21 08:12 GabrieleSantin

i find a datasets file on graphgym fold on your video, but i have not it , the version of official release alsi have not ===>(https://github.com/pyg-team/pytorch_geometric/tree/master/graphgym)

this is my error message

Traceback (most recent call last):
  File "main.py", line 5, in <module>
    import custom_graphgym  # noqa, register custom modules
  File "C:\Users\admin\pytorch_geometric\graphgym\custom_graphgym\__init__.py", line 2, in <module>
    from .config import * # noqa
  File "C:\Users\admin\pytorch_geometric\graphgym\custom_graphgym\config\example.py", line 6, in <module>
    @register_config('example')
TypeError: register_config() missing 1 required positional argument: 'module'
Traceback (most recent call last):
  File "main.py", line 5, in <module>
    import custom_graphgym  # noqa, register custom modules
  File "C:\Users\admin\pytorch_geometric\graphgym\custom_graphgym\__init__.py", line 2, in <module>
    from .config import * # noqa
  File "C:\Users\admin\pytorch_geometric\graphgym\custom_graphgym\config\example.py", line 6, in <module>
    @register_config('example')
TypeError: register_config() missing 1 required positional argument: 'module'
Traceback (most recent call last):
  File "main.py", line 5, in <module>
    import custom_graphgym  # noqa, register custom modules
  File "C:\Users\admin\pytorch_geometric\graphgym\custom_graphgym\__init__.py", line 2, in <module>
    from .config import * # noqa
  File "C:\Users\admin\pytorch_geometric\graphgym\custom_graphgym\config\example.py", line 6, in <module>
    @register_config('example')
TypeError: register_config() missing 1 required positional argument: 'module'

Dec 15 '21 14:12 faker09

i find a difference between the graphgym fold like your represent on video and my graphgym fold. you have a datasets file on graphgym fold , but i have not , the version of official released also. look here(https://github.com/pyg-team/pytorch_geometric/tree/master/graphgym) i don't know whether it is reason

this is my error message

Traceback (most recent call last):
  File "main.py", line 5, in <module>
    import custom_graphgym  # noqa, register custom modules
  File "C:\Users\admin\pytorch_geometric\graphgym\custom_graphgym\__init__.py", line 2, in <module>
    from .config import * # noqa
  File "C:\Users\admin\pytorch_geometric\graphgym\custom_graphgym\config\example.py", line 6, in <module>
    @register_config('example')
TypeError: register_config() missing 1 required positional argument: 'module'
Traceback (most recent call last):
  File "main.py", line 5, in <module>
    import custom_graphgym  # noqa, register custom modules
  File "C:\Users\admin\pytorch_geometric\graphgym\custom_graphgym\__init__.py", line 2, in <module>
    from .config import * # noqa
  File "C:\Users\admin\pytorch_geometric\graphgym\custom_graphgym\config\example.py", line 6, in <module>
    @register_config('example')
TypeError: register_config() missing 1 required positional argument: 'module'
Traceback (most recent call last):
  File "main.py", line 5, in <module>
    import custom_graphgym  # noqa, register custom modules
  File "C:\Users\admin\pytorch_geometric\graphgym\custom_graphgym\__init__.py", line 2, in <module>
    from .config import * # noqa
  File "C:\Users\admin\pytorch_geometric\graphgym\custom_graphgym\config\example.py", line 6, in <module>
    @register_config('example')
TypeError: register_config() missing 1 required positional argument: 'module'

Dec 15 '21 14:12 faker09

Hi, the error seems to be related to the new decorator @register_config, which was added in a commit 3 days ago. I did not had a look into it yet. Maybe you can try to checkout an older commit and see if it works?

Dec 15 '21 16:12 GabrieleSantin

i try to back the older commit. it does not working.

Dec 16 '21 09:12 faker09

Do you get the same error?

Dec 16 '21 09:12 GabrieleSantin

this is commit-ID ==>5b4ccafa1409aa4711c0f11713ad53cc79806383 and this is error message

Traceback (most recent call last):
  File "main.py", line 5, in <module>
    import custom_graphgym  # noqa, register custom modules
  File "C:\Users\admin\pytorch_geometric\graphgym\custom_graphgym\__init__.py", line 2, in <module>
    from .config import * # noqa
  File "C:\Users\admin\pytorch_geometric\graphgym\custom_graphgym\config\example.py", line 6, in <module>
    @register_config('example')
TypeError: register_config() missing 1 required positional argument: 'module'
Traceback (most recent call last):
  File "main.py", line 5, in <module>
    import custom_graphgym  # noqa, register custom modules
  File "C:\Users\admin\pytorch_geometric\graphgym\custom_graphgym\__init__.py", line 2, in <module>
    from .config import * # noqa
  File "C:\Users\admin\pytorch_geometric\graphgym\custom_graphgym\config\example.py", line 6, in <module>
    @register_config('example')
TypeError: register_config() missing 1 required positional argument: 'module'
Traceback (most recent call last):
  File "main.py", line 5, in <module>
    import custom_graphgym  # noqa, register custom modules
  File "C:\Users\admin\pytorch_geometric\graphgym\custom_graphgym\__init__.py", line 2, in <module>
    from .config import * # noqa
  File "C:\Users\admin\pytorch_geometric\graphgym\custom_graphgym\config\example.py", line 6, in <module>
    @register_config('example')
TypeError: register_config() missing 1 required positional argument: 'module'

if we back the more old commits, the error message is different

Dec 16 '21 09:12 faker09

Can you give me the error message that you get with the old commit?

Dec 17 '21 15:12 GabrieleSantin

this is commit id ==> 20cb2ed89a128119924fdd1f90ff0f57e34b68ce

and this is different error message

Traceback (most recent call last):
  File "main.py", line 5, in <module>
    import custom_graphgym  # noqa, register custom modules
  File "C:\Users\admin\pytorch_geometric\graphgym\custom_graphgym\__init__.py", line 3, in <module>
    from .encoder import * # noqa
  File "C:\Users\admin\pytorch_geometric\graphgym\custom_graphgym\encoder\example.py", line 5, in <module>
    from ogb.utils.features import get_bond_feature_dims
ModuleNotFoundError: No module named 'ogb'
Traceback (most recent call last):
  File "main.py", line 5, in <module>
    import custom_graphgym  # noqa, register custom modules
  File "C:\Users\admin\pytorch_geometric\graphgym\custom_graphgym\__init__.py", line 3, in <module>
    from .encoder import * # noqa
  File "C:\Users\admin\pytorch_geometric\graphgym\custom_graphgym\encoder\example.py", line 5, in <module>
    from ogb.utils.features import get_bond_feature_dims
ModuleNotFoundError: No module named 'ogb'
Traceback (most recent call last):
  File "main.py", line 5, in <module>
    import custom_graphgym  # noqa, register custom modules
  File "C:\Users\admin\pytorch_geometric\graphgym\custom_graphgym\__init__.py", line 3, in <module>
    from .encoder import * # noqa
  File "C:\Users\admin\pytorch_geometric\graphgym\custom_graphgym\encoder\example.py", line 5, in <module>
    from ogb.utils.features import get_bond_feature_dims
ModuleNotFoundError: No module named 'ogb'

Dec 21 '21 02:12 faker09

which commit ID do you used in video?

Dec 21 '21 02:12 faker09

This one: https://github.com/pyg-team/pytorch_geometric/commit/5f8e99d033a596426ef502c2ea4b9be89ec58f38 In your last error message, it looks like you are missing ogb. You can get e.g. via conda https://anaconda.org/conda-forge/ogb

Dec 21 '21 16:12 GabrieleSantin

truthly , it does not working. now i make up to date. there are the message error. hope you can help me.

Traceback (most recent call last):
  File "main.py", line 5, in <module>
    import custom_graphgym  # noqa, register custom modules
  File "C:\Users\admin\pytorch_geometric\graphgym\custom_graphgym\__init__.py", line 2, in <module>
    from .config import *  # noqa
  File "C:\Users\admin\pytorch_geometric\graphgym\custom_graphgym\config\example.py", line 6, in <module>
    @register_config('example')
TypeError: register_config() missing 1 required positional argument: 'module'
Traceback (most recent call last):
  File "main.py", line 5, in <module>
    import custom_graphgym  # noqa, register custom modules
  File "C:\Users\admin\pytorch_geometric\graphgym\custom_graphgym\__init__.py", line 2, in <module>
    from .config import *  # noqa
  File "C:\Users\admin\pytorch_geometric\graphgym\custom_graphgym\config\example.py", line 6, in <module>
    @register_config('example')
TypeError: register_config() missing 1 required positional argument: 'module'
Traceback (most recent call last):
  File "main.py", line 5, in <module>
    import custom_graphgym  # noqa, register custom modules
  File "C:\Users\admin\pytorch_geometric\graphgym\custom_graphgym\__init__.py", line 2, in <module>
    from .config import *  # noqa
  File "C:\Users\admin\pytorch_geometric\graphgym\custom_graphgym\config\example.py", line 6, in <module>
    @register_config('example')
TypeError: register_config() missing 1 required positional argument: 'module'

Dec 24 '21 07:12 faker09