scrattch.vis

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Dashes in gene names cause missing gene errors.

hypercompetent

If group_violins_plot has a aes(group =), can we get proper violin separation even for groups with identical color values?

hypercompetent

If a group is missing (e.g. only group_id 1 and group_id 3 are present) but groups 1:3 are selected for plotting in a group heatmap plot, there is a blank...

hypercompetent

Warning messages: 1: In readLines(file) : incomplete final line found on '../scrattch.vis/R/data_formatting.R' 2: In readLines(file) : incomplete final line found on '../scrattch.vis/R/data_structure.R' 3: In readLines(file) : incomplete final line found...

adrisede

add_sample_xpos() throws error in sample plots

3

Via Trygve: I’m getting some errors with the MTG shiny. I can’t plot Cell Barplot or Cell Heatmap in scrattch (Group plots work fine). Error logs show this error being...

hypercompetent

[ ] plot_main.R [ ] degenes.R [ ] data_structure.R: - check_db_structure - db_to_list - check_list_structure - check_feather_structure - write_database -auto_sample_names -auto_format [ ] misc.R: - values_to_colors - tmean - prop_gt0...

adrisede

When row normalization is used for group heatmaps, all groups are considered instead of only the displayed groups. This is probably a filtering order issue.

hypercompetent