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Optimization of single-cell biophysically detailed models

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Hello, Thanks for sharing your code. With a few minor tweaks I can run the following steps: ``` 1. scripts/run_preprocessing.py --input_json ./test_input_files/test_preprocess_input.json 2. scripts/passive_fittting.py --input_json ./test_input_files/test_passive_input_1.json 3. scripts/passive_fittting.py --input_json ./test_input_files/test_passive_input_2.json...