CompareOnBranches function

[mvereten]

Dear ElPiGraph team,

I've gone through the tutorial in R and the last function, CompareOnBranches gives me the following: [1] "Feature selection by variance" NULL Warning messages: 1: In type.convert.default(X[[i]], ...) : 'as.is' should be specified by the caller; using TRUE 2: In type.convert.default(X[[i]], ...) : 'as.is' should be specified by the caller; using TRUE 3: In type.convert.default(X[[i]], ...) : 'as.is' should be specified by the caller; using TRUE 4: In type.convert.default(X[[i]], ...) : 'as.is' should be specified by the caller; using TRUE

Please could you let me know how to fix this or get to the plots with features in pseudotimes? Are features the PCs in this case? Is there a way to plot individual genes at the pseudotimes with a function?

Thanks, Maria