seqseek icon indicating copy to clipboard operation
seqseek copied to clipboard

Does this support sequences from databases other than UCSC?

Open programmingprincess opened this issue 6 years ago • 1 comments

For instance, are we able to provide a different fasta file?

programmingprincess avatar Feb 13 '20 20:02 programmingprincess

It looks like this project is really geared to the specific reference assemblies 23andMe uses. I was just taking a look at seqseek to see how similar it is to my project, which would definitely be appropriate for accessing sequences from a difference fasta file: https://github.com/mdshw5/pyfaidx.

mdshw5 avatar May 04 '20 16:05 mdshw5