Add custom feature to plot

[jgarces02]

I'm doing some testing with enclone for generating honey plots and it works nicely. I'd like to add a custom variable (eg, annotated cells for each barcode) and color according it. Is there any way to do it, please?

Also, does enclone generate any kind of file, table or whatever for importing it to R and graph the honey plots more aesthetically?

Thanks in advance.

[mathiasbio]

This could perhaps be solved by this: https://github.com/Clinical-Genomics/BALSAMIC/issues/1385

[mathiasbio]

I think maybe the previously mentioned GENS for TGA issue could solve this, but from what I have seen it could be that the SNV data for certain genes is not dense enough from gnomad af5. Maybe this could be improved by including also the DNAscope germline variants from the specific sample, or to use a different gnomad filtered VCF to include more rare SNV positions too.